How To Install embassy-domsearch on Debian 9
Introduction
In this tutorial we learn how to install embassy-domsearch on Debian 9.
What is embassy-domsearch
embassy-domsearch is:
The DOMSEARCH programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.
Applications in this DOMSEARCH release are seqfraggle (removes fragment sequences from DHF files), seqnr (removes redundancy from DHF files), seqsearch (generates PSI-BLAST hits (DHF file) from a DAF file), seqsort (Remove ambiguous classified sequences from DHF files) and seqwords (Generates DHF files from keyword search of UniProt).
There are three methods to install embassy-domsearch on Debian 9. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install embassy-domsearch Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install embassy-domsearch using apt-get by running the following command:
sudo apt-get -y install embassy-domsearch
Install embassy-domsearch Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install embassy-domsearch using apt by running the following command:
sudo apt -y install embassy-domsearch
Install embassy-domsearch Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install embassy-domsearch using aptitude by running the following command:
sudo aptitude -y install embassy-domsearch
How To Uninstall embassy-domsearch on Debian 9
To uninstall only the embassy-domsearch package we can use the following command:
sudo apt-get remove embassy-domsearch
Uninstall embassy-domsearch And Its Dependencies
To uninstall embassy-domsearch and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove embassy-domsearch
Remove embassy-domsearch Configurations and Data
To remove embassy-domsearch configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge embassy-domsearch
Remove embassy-domsearch configuration, data, and all of its dependencies
We can use the following command to remove embassy-domsearch configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge embassy-domsearch
Dependencies
embassy-domsearch have the following dependencies:
References
Summary
In this tutorial we learn how to install embassy-domsearch package on Debian 9 using different package management tools: apt, apt-get and aptitude.