How To Install r-cran-rcdk on Debian 12
Introduction
In this tutorial we learn how to install r-cran-rcdk on Debian 12.
What is r-cran-rcdk
r-cran-rcdk is:
Allows the user to access functionality in the ‘CDK’, a Java framework for chemoinformatics. This allows the user to load molecules, evaluate fingerprints, calculate molecular descriptors and so on. In addition, the ‘CDK’ API allows the user to view structures in 2D.
There are three methods to install r-cran-rcdk on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-rcdk Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-rcdk using apt-get by running the following command:
sudo apt-get -y install r-cran-rcdk
Install r-cran-rcdk Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-rcdk using apt by running the following command:
sudo apt -y install r-cran-rcdk
Install r-cran-rcdk Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-rcdk using aptitude by running the following command:
sudo aptitude -y install r-cran-rcdk
How To Uninstall r-cran-rcdk on Debian 12
To uninstall only the r-cran-rcdk package we can use the following command:
sudo apt-get remove r-cran-rcdk
Uninstall r-cran-rcdk And Its Dependencies
To uninstall r-cran-rcdk and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-cran-rcdk
Remove r-cran-rcdk Configurations and Data
To remove r-cran-rcdk configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-cran-rcdk
Remove r-cran-rcdk configuration, data, and all of its dependencies
We can use the following command to remove r-cran-rcdk configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-rcdk
Dependencies
r-cran-rcdk have the following dependencies:
- r-base-core
- r-api-4.0
- r-cran-rcdklibs
- r-cran-fingerprint
- r-cran-rjava
- r-cran-png
- r-cran-iterators
- r-cran-itertools
- libcdkr-java
References
Summary
In this tutorial we learn how to install r-cran-rcdk package on Debian 12 using different package management tools: apt, apt-get and aptitude.
