How To Install r-cran-heatmaply on Debian 12
Introduction
In this tutorial we learn how to install r-cran-heatmaply on Debian 12.
What is r-cran-heatmaply
r-cran-heatmaply is:
Create interactive cluster ‘heatmaps’ that can be saved as a stand alone HTML file, embedded in ‘R Markdown’ documents or in a ‘Shiny’ app, and available in the ‘RStudio’ viewer pane. Hover the mouse pointer over a cell to show details or drag a rectangle to zoom. A ‘heatmap’ is a popular graphical method for visualizing high-dimensional data, in which a table of numbers are encoded as a grid of colored cells. The rows and columns of the matrix are ordered to highlight patterns and are often accompanied by ‘dendrograms’. ‘Heatmaps’ are used in many fields for visualizing observations, correlations, missing values patterns, and more. Interactive ‘heatmaps’ allow the inspection of specific value by hovering the mouse over a cell, as well as zooming into a region of the ‘heatmap’ by dragging a rectangle around the relevant area. This work is based on the ‘ggplot2’ and ‘plotly.js’ engine. It produces similar ‘heatmaps’ as ‘heatmap.2’ or ‘d3heatmap’, with the advantage of speed (‘plotly.js’ is able to handle larger size matrix), the ability to zoom from the ‘dendrogram’ panes, and the placing of factor variables in the sides of the ‘heatmap’.
There are three methods to install r-cran-heatmaply on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-heatmaply Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-heatmaply using apt-get by running the following command:
sudo apt-get -y install r-cran-heatmaply
Install r-cran-heatmaply Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-heatmaply using apt by running the following command:
sudo apt -y install r-cran-heatmaply
Install r-cran-heatmaply Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-heatmaply using aptitude by running the following command:
sudo aptitude -y install r-cran-heatmaply
How To Uninstall r-cran-heatmaply on Debian 12
To uninstall only the r-cran-heatmaply package we can use the following command:
sudo apt-get remove r-cran-heatmaply
Uninstall r-cran-heatmaply And Its Dependencies
To uninstall r-cran-heatmaply and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-cran-heatmaply
Remove r-cran-heatmaply Configurations and Data
To remove r-cran-heatmaply configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-cran-heatmaply
Remove r-cran-heatmaply configuration, data, and all of its dependencies
We can use the following command to remove r-cran-heatmaply configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-heatmaply
Dependencies
r-cran-heatmaply have the following dependencies:
- r-base-core
- r-api-4.0
- r-cran-plotly
- r-cran-viridis
- r-cran-ggplot2
- r-cran-dendextend
- r-cran-magrittr
- r-cran-reshape2
- r-cran-scales
- r-cran-seriation
- r-cran-colorspace
- r-cran-rcolorbrewer
- r-cran-htmlwidgets
- r-cran-webshot
- r-cran-assertthat
- r-cran-egg
References
Summary
In this tutorial we learn how to install r-cran-heatmaply package on Debian 12 using different package management tools: apt, apt-get and aptitude.
