How To Install r-bioc-sparsematrixstats on Debian 12
Introduction
In this tutorial we learn how to install r-bioc-sparsematrixstats on Debian 12.
What is r-bioc-sparsematrixstats
r-bioc-sparsematrixstats is:
High performance functions for row and column operations on sparse matrices. For example: col / rowMeans2, col / rowMedians, col / rowVars etc. Currently, the optimizations are limited to data in the column sparse format. This package is inspired by the matrixStats package by Henrik Bengtsson.
There are three methods to install r-bioc-sparsematrixstats on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-sparsematrixstats Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-sparsematrixstats using apt-get by running the following command:
sudo apt-get -y install r-bioc-sparsematrixstats
Install r-bioc-sparsematrixstats Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-bioc-sparsematrixstats using apt by running the following command:
sudo apt -y install r-bioc-sparsematrixstats
Install r-bioc-sparsematrixstats Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-sparsematrixstats using aptitude by running the following command:
sudo aptitude -y install r-bioc-sparsematrixstats
How To Uninstall r-bioc-sparsematrixstats on Debian 12
To uninstall only the r-bioc-sparsematrixstats package we can use the following command:
sudo apt-get remove r-bioc-sparsematrixstats
Uninstall r-bioc-sparsematrixstats And Its Dependencies
To uninstall r-bioc-sparsematrixstats and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-bioc-sparsematrixstats
Remove r-bioc-sparsematrixstats Configurations and Data
To remove r-bioc-sparsematrixstats configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-bioc-sparsematrixstats
Remove r-bioc-sparsematrixstats configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-sparsematrixstats configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-sparsematrixstats
Dependencies
r-bioc-sparsematrixstats have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.16
- r-bioc-matrixgenerics
- r-cran-rcpp
- r-cran-matrix
- r-cran-matrixstats
- libc6
- libgcc-s1
- libstdc++6
References
Summary
In this tutorial we learn how to install r-bioc-sparsematrixstats package on Debian 12 using different package management tools: apt, apt-get and aptitude.
