How To Install snakemake-doc on Fedora 36
In this tutorial we learn how to install snakemake-doc in Fedora 36. snakemake-doc is Workflow management system to create reproducible and scalable data analyses
Introduction
In this tutorial we learn how to install snakemake-doc on Fedora 36.
What is snakemake-doc
The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments, without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.
We can use yum or dnf to install snakemake-doc on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install snakemake-doc.
Install snakemake-doc on Fedora 36 Using dnf
Update yum database with dnf using the following command.
sudo dnf makecache --refresh
After updating yum database, We can install snakemake-doc using dnf by running the following command:
sudo dnf -y install snakemake-doc
Install snakemake-doc on Fedora 36 Using yum
Update yum database with yum using the following command.
sudo yum makecache --refresh
After updating yum database, We can install snakemake-doc using yum by running the following command:
sudo yum -y install snakemake-doc
How To Uninstall snakemake-doc on Fedora 36
To uninstall only the snakemake-doc package we can use the following command:
sudo dnf remove snakemake-doc
snakemake-doc Package Contents on Fedora 36
/usr/share/doc/snakemake-doc
/usr/share/doc/snakemake-doc/doctrees
/usr/share/doc/snakemake-doc/doctrees/api_reference
/usr/share/doc/snakemake-doc/doctrees/api_reference/internal
/usr/share/doc/snakemake-doc/doctrees/api_reference/internal/modules.doctree
/usr/share/doc/snakemake-doc/doctrees/api_reference/internal/snakemake.doctree
/usr/share/doc/snakemake-doc/doctrees/api_reference/internal/snakemake.remote.doctree
/usr/share/doc/snakemake-doc/doctrees/api_reference/internal/snakemake.report.doctree
/usr/share/doc/snakemake-doc/doctrees/api_reference/snakemake.doctree
/usr/share/doc/snakemake-doc/doctrees/api_reference/snakemake_utils.doctree
/usr/share/doc/snakemake-doc/doctrees/environment.pickle
/usr/share/doc/snakemake-doc/doctrees/executing
/usr/share/doc/snakemake-doc/doctrees/executing/caching.doctree
/usr/share/doc/snakemake-doc/doctrees/executing/cli.doctree
/usr/share/doc/snakemake-doc/doctrees/executing/cloud.doctree
/usr/share/doc/snakemake-doc/doctrees/executing/cluster.doctree
/usr/share/doc/snakemake-doc/doctrees/executing/grouping.doctree
/usr/share/doc/snakemake-doc/doctrees/executing/interoperability.doctree
/usr/share/doc/snakemake-doc/doctrees/executing/monitoring.doctree
/usr/share/doc/snakemake-doc/doctrees/executor_tutorial
/usr/share/doc/snakemake-doc/doctrees/executor_tutorial/azure_aks.doctree
/usr/share/doc/snakemake-doc/doctrees/executor_tutorial/google_lifesciences.doctree
/usr/share/doc/snakemake-doc/doctrees/executor_tutorial/tutorial.doctree
/usr/share/doc/snakemake-doc/doctrees/getting_started
/usr/share/doc/snakemake-doc/doctrees/getting_started/installation.doctree
/usr/share/doc/snakemake-doc/doctrees/index.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info
/usr/share/doc/snakemake-doc/doctrees/project_info/authors.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info/citations.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info/contributing.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info/faq.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info/history.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info/license.doctree
/usr/share/doc/snakemake-doc/doctrees/project_info/more_resources.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles
/usr/share/doc/snakemake-doc/doctrees/snakefiles/best_practices.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/configuration.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/deployment.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/foreign_wms.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/modularization.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/remote_files.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/reporting.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/rules.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/testing.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/utils.doctree
/usr/share/doc/snakemake-doc/doctrees/snakefiles/writing_snakefiles.doctree
/usr/share/doc/snakemake-doc/doctrees/tutorial
/usr/share/doc/snakemake-doc/doctrees/tutorial/additional_features.doctree
/usr/share/doc/snakemake-doc/doctrees/tutorial/advanced.doctree
/usr/share/doc/snakemake-doc/doctrees/tutorial/basics.doctree
/usr/share/doc/snakemake-doc/doctrees/tutorial/setup.doctree
/usr/share/doc/snakemake-doc/doctrees/tutorial/short.doctree
/usr/share/doc/snakemake-doc/doctrees/tutorial/tutorial.doctree
/usr/share/doc/snakemake-doc/html
/usr/share/doc/snakemake-doc/html/.buildinfo
/usr/share/doc/snakemake-doc/html/_downloads
/usr/share/doc/snakemake-doc/html/_downloads/b10d83889c3905e7b7557a62144a51ca
/usr/share/doc/snakemake-doc/html/_downloads/b10d83889c3905e7b7557a62144a51ca/report.html
/usr/share/doc/snakemake-doc/html/_downloads/eb343cb62a4fa660e2596bef68f75e95
/usr/share/doc/snakemake-doc/html/_downloads/eb343cb62a4fa660e2596bef68f75e95/custom-stylesheet.css
/usr/share/doc/snakemake-doc/html/_images
/usr/share/doc/snakemake-doc/html/_images/dag_call.png
/usr/share/doc/snakemake-doc/html/_images/dag_index.png
/usr/share/doc/snakemake-doc/html/_images/idea.png
/usr/share/doc/snakemake-doc/html/_images/quals.svg
/usr/share/doc/snakemake-doc/html/_images/results-google-storage.png
/usr/share/doc/snakemake-doc/html/_images/snakemake-notebook-demo.gif
/usr/share/doc/snakemake-doc/html/_images/upload-google-storage.png
/usr/share/doc/snakemake-doc/html/_modules
/usr/share/doc/snakemake-doc/html/_modules/index.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake
/usr/share/doc/snakemake-doc/html/_modules/snakemake.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/benchmark.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/checkpoints.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/common.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/cwl.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/dag.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/decorators.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/exceptions.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/executors.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/io.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/jobs.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/logging.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/output_index.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/parser.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/persistence.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/remote
/usr/share/doc/snakemake-doc/html/_modules/snakemake/remote.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/remote/EGA.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/remote/HTTP.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/remote/S3.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/report.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/rules.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/scheduler.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/script.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/shell.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/stats.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/utils.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/workflow.html
/usr/share/doc/snakemake-doc/html/_modules/snakemake/wrapper.html
/usr/share/doc/snakemake-doc/html/_sources
/usr/share/doc/snakemake-doc/html/_sources/api_reference
/usr/share/doc/snakemake-doc/html/_sources/api_reference/internal
/usr/share/doc/snakemake-doc/html/_sources/api_reference/internal/modules.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/api_reference/internal/snakemake.remote.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/api_reference/internal/snakemake.report.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/api_reference/internal/snakemake.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/api_reference/snakemake.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/api_reference/snakemake_utils.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing
/usr/share/doc/snakemake-doc/html/_sources/executing/caching.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing/cli.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing/cloud.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing/cluster.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing/grouping.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing/interoperability.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executing/monitoring.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executor_tutorial
/usr/share/doc/snakemake-doc/html/_sources/executor_tutorial/azure_aks.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executor_tutorial/google_lifesciences.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/executor_tutorial/tutorial.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/getting_started
/usr/share/doc/snakemake-doc/html/_sources/getting_started/installation.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/index.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info
/usr/share/doc/snakemake-doc/html/_sources/project_info/authors.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info/citations.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info/contributing.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info/faq.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info/history.md.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info/license.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/project_info/more_resources.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/best_practices.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/configuration.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/deployment.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/foreign_wms.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/modularization.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/remote_files.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/reporting.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/rules.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/testing.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/utils.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/snakefiles/writing_snakefiles.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/tutorial
/usr/share/doc/snakemake-doc/html/_sources/tutorial/additional_features.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/tutorial/advanced.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/tutorial/basics.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/tutorial/setup.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/tutorial/short.rst.txt
/usr/share/doc/snakemake-doc/html/_sources/tutorial/tutorial.rst.txt
/usr/share/doc/snakemake-doc/html/_static
/usr/share/doc/snakemake-doc/html/_static/basic.css
/usr/share/doc/snakemake-doc/html/_static/css
/usr/share/doc/snakemake-doc/html/_static/css/badge_only.css
/usr/share/doc/snakemake-doc/html/_static/css/theme.css
/usr/share/doc/snakemake-doc/html/_static/doctools.js
/usr/share/doc/snakemake-doc/html/_static/documentation_options.js
/usr/share/doc/snakemake-doc/html/_static/file.png
/usr/share/doc/snakemake-doc/html/_static/jquery-3.5.1.js
/usr/share/doc/snakemake-doc/html/_static/jquery.js
/usr/share/doc/snakemake-doc/html/_static/js
/usr/share/doc/snakemake-doc/html/_static/js/badge_only.js
/usr/share/doc/snakemake-doc/html/_static/js/theme.js
/usr/share/doc/snakemake-doc/html/_static/language_data.js
/usr/share/doc/snakemake-doc/html/_static/minus.png
/usr/share/doc/snakemake-doc/html/_static/plus.png
/usr/share/doc/snakemake-doc/html/_static/pygments.css
/usr/share/doc/snakemake-doc/html/_static/searchtools.js
/usr/share/doc/snakemake-doc/html/_static/sphinx-argparse.css
/usr/share/doc/snakemake-doc/html/_static/theme.css
/usr/share/doc/snakemake-doc/html/_static/underscore-1.13.1.js
/usr/share/doc/snakemake-doc/html/_static/underscore.js
/usr/share/doc/snakemake-doc/html/api_reference
/usr/share/doc/snakemake-doc/html/api_reference/internal
/usr/share/doc/snakemake-doc/html/api_reference/internal/modules.html
/usr/share/doc/snakemake-doc/html/api_reference/internal/snakemake.html
/usr/share/doc/snakemake-doc/html/api_reference/internal/snakemake.remote.html
/usr/share/doc/snakemake-doc/html/api_reference/internal/snakemake.report.html
/usr/share/doc/snakemake-doc/html/api_reference/snakemake.html
/usr/share/doc/snakemake-doc/html/api_reference/snakemake_utils.html
/usr/share/doc/snakemake-doc/html/executing
/usr/share/doc/snakemake-doc/html/executing/caching.html
/usr/share/doc/snakemake-doc/html/executing/cli.html
/usr/share/doc/snakemake-doc/html/executing/cloud.html
/usr/share/doc/snakemake-doc/html/executing/cluster.html
/usr/share/doc/snakemake-doc/html/executing/grouping.html
/usr/share/doc/snakemake-doc/html/executing/interoperability.html
/usr/share/doc/snakemake-doc/html/executing/monitoring.html
/usr/share/doc/snakemake-doc/html/executor_tutorial
/usr/share/doc/snakemake-doc/html/executor_tutorial/azure_aks.html
/usr/share/doc/snakemake-doc/html/executor_tutorial/google_lifesciences.html
/usr/share/doc/snakemake-doc/html/executor_tutorial/tutorial.html
/usr/share/doc/snakemake-doc/html/genindex.html
/usr/share/doc/snakemake-doc/html/getting_started
/usr/share/doc/snakemake-doc/html/getting_started/installation.html
/usr/share/doc/snakemake-doc/html/index.html
/usr/share/doc/snakemake-doc/html/objects.inv
/usr/share/doc/snakemake-doc/html/project_info
/usr/share/doc/snakemake-doc/html/project_info/authors.html
/usr/share/doc/snakemake-doc/html/project_info/citations.html
/usr/share/doc/snakemake-doc/html/project_info/contributing.html
/usr/share/doc/snakemake-doc/html/project_info/faq.html
/usr/share/doc/snakemake-doc/html/project_info/history.html
/usr/share/doc/snakemake-doc/html/project_info/license.html
/usr/share/doc/snakemake-doc/html/project_info/more_resources.html
/usr/share/doc/snakemake-doc/html/py-modindex.html
/usr/share/doc/snakemake-doc/html/search.html
/usr/share/doc/snakemake-doc/html/searchindex.js
/usr/share/doc/snakemake-doc/html/snakefiles
/usr/share/doc/snakemake-doc/html/snakefiles/best_practices.html
/usr/share/doc/snakemake-doc/html/snakefiles/configuration.html
/usr/share/doc/snakemake-doc/html/snakefiles/deployment.html
/usr/share/doc/snakemake-doc/html/snakefiles/foreign_wms.html
/usr/share/doc/snakemake-doc/html/snakefiles/modularization.html
/usr/share/doc/snakemake-doc/html/snakefiles/remote_files.html
/usr/share/doc/snakemake-doc/html/snakefiles/reporting.html
/usr/share/doc/snakemake-doc/html/snakefiles/rules.html
/usr/share/doc/snakemake-doc/html/snakefiles/testing.html
/usr/share/doc/snakemake-doc/html/snakefiles/utils.html
/usr/share/doc/snakemake-doc/html/snakefiles/writing_snakefiles.html
/usr/share/doc/snakemake-doc/html/tutorial
/usr/share/doc/snakemake-doc/html/tutorial/additional_features.html
/usr/share/doc/snakemake-doc/html/tutorial/advanced.html
/usr/share/doc/snakemake-doc/html/tutorial/basics.html
/usr/share/doc/snakemake-doc/html/tutorial/setup.html
/usr/share/doc/snakemake-doc/html/tutorial/short.html
/usr/share/doc/snakemake-doc/html/tutorial/tutorial.html
/usr/share/licenses/snakemake-doc
/usr/share/licenses/snakemake-doc/LICENSE.md
References
Summary
In this tutorial we learn how to install snakemake-doc on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).