How To Install acedb-other-dotter on Debian 9
Introduction
In this tutorial we learn how to install acedb-other-dotter
on Debian 9.
What is acedb-other-dotter
acedb-other-dotter is:
For the analysis of biological sequences, a general principle is to compare corresponding regions between related proteins, RNA or DNA.
Dotter, as an interactive dotplot with varying thresholds, displays graphically the similarity of DNA or protein sequence to itself or another sequence.
There are three methods to install acedb-other-dotter
on Debian 9. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install acedb-other-dotter Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install acedb-other-dotter
using apt-get
by running the following command:
sudo apt-get -y install acedb-other-dotter
Install acedb-other-dotter Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install acedb-other-dotter
using apt
by running the following command:
sudo apt -y install acedb-other-dotter
Install acedb-other-dotter Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install acedb-other-dotter
using aptitude
by running the following command:
sudo aptitude -y install acedb-other-dotter
How To Uninstall acedb-other-dotter on Debian 9
To uninstall only the acedb-other-dotter
package we can use the following command:
sudo apt-get remove acedb-other-dotter
Uninstall acedb-other-dotter And Its Dependencies
To uninstall acedb-other-dotter
and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove acedb-other-dotter
Remove acedb-other-dotter Configurations and Data
To remove acedb-other-dotter
configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge acedb-other-dotter
Remove acedb-other-dotter configuration, data, and all of its dependencies
We can use the following command to remove acedb-other-dotter
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge acedb-other-dotter
Dependencies
acedb-other-dotter have the following dependencies:
- libatk1.0-0
- libc6
- libcairo2
- libfontconfig1
- libfreetype6
- libgdk-pixbuf2.0-0
- libglib2.0-0
- libgtk2.0-0
- libpango-1.0-0
- libpangocairo-1.0-0
- libpangoft2-1.0-0
- libreadline7
- libx11-6
References
Summary
In this tutorial we learn how to install acedb-other-dotter
package on Debian 9 using different package management tools: apt
, apt-get
and aptitude
.