How To Install acedb-other-belvu on Debian 9
Introduction
In this tutorial we learn how to install acedb-other-belvu
on Debian 9.
What is acedb-other-belvu
acedb-other-belvu is:
For the analysis of biological sequences, a general principle is to corresponding regions between related proteins, RNA or DNA. Written next to each other, corresponding positions above each other, one has prepared an alignment.
Belvu is best known for its perfect implementation of the Stockholm format of multiple sequence alignments, since upstream is maintaining that. That is for instance used in the Pfam and Rfam databases.
There are three methods to install acedb-other-belvu
on Debian 9. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install acedb-other-belvu Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install acedb-other-belvu
using apt-get
by running the following command:
sudo apt-get -y install acedb-other-belvu
Install acedb-other-belvu Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install acedb-other-belvu
using apt
by running the following command:
sudo apt -y install acedb-other-belvu
Install acedb-other-belvu Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install acedb-other-belvu
using aptitude
by running the following command:
sudo aptitude -y install acedb-other-belvu
How To Uninstall acedb-other-belvu on Debian 9
To uninstall only the acedb-other-belvu
package we can use the following command:
sudo apt-get remove acedb-other-belvu
Uninstall acedb-other-belvu And Its Dependencies
To uninstall acedb-other-belvu
and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove acedb-other-belvu
Remove acedb-other-belvu Configurations and Data
To remove acedb-other-belvu
configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge acedb-other-belvu
Remove acedb-other-belvu configuration, data, and all of its dependencies
We can use the following command to remove acedb-other-belvu
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge acedb-other-belvu
Dependencies
acedb-other-belvu have the following dependencies:
- libatk1.0-0
- libc6
- libcairo2
- libfontconfig1
- libfreetype6
- libgdk-pixbuf2.0-0
- libglib2.0-0
- libgtk2.0-0
- libpango-1.0-0
- libpangocairo-1.0-0
- libpangoft2-1.0-0
- libreadline7
- libx11-6
References
Summary
In this tutorial we learn how to install acedb-other-belvu
package on Debian 9 using different package management tools: apt
, apt-get
and aptitude
.