How To Install snakemake-doc on Ubuntu 22.04
Introduction
In this tutorial we learn how to install snakemake-doc
on Ubuntu 22.04.
What is snakemake-doc
snakemake-doc is:
Build systems like GNU Make are frequently used to create complicated workflows, e.g. in bioinformatics. This project aims to reduce the complexity of creating workflows by providing a clean and modern domain specific language (DSL) in Python style, together with a fast and comfortable execution environment.
This package provides the Sphinx-generated documentation and examples.
There are three methods to install snakemake-doc
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install snakemake-doc Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install snakemake-doc
using apt-get
by running the following command:
sudo apt-get -y install snakemake-doc
Install snakemake-doc Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install snakemake-doc
using apt
by running the following command:
sudo apt -y install snakemake-doc
Install snakemake-doc Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install snakemake-doc
using aptitude
by running the following command:
sudo aptitude -y install snakemake-doc
How To Uninstall snakemake-doc on Ubuntu 22.04
To uninstall only the snakemake-doc
package we can use the following command:
sudo apt-get remove snakemake-doc
Uninstall snakemake-doc And Its Dependencies
To uninstall snakemake-doc
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove snakemake-doc
Remove snakemake-doc Configurations and Data
To remove snakemake-doc
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge snakemake-doc
Remove snakemake-doc configuration, data, and all of its dependencies
We can use the following command to remove snakemake-doc
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge snakemake-doc
References
Summary
In this tutorial we learn how to install snakemake-doc
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.