How To Install shapeit4-example on Ubuntu 22.04
Introduction
In this tutorial we learn how to install shapeit4-example on Ubuntu 22.04.
What is shapeit4-example
shapeit4-example is:
Segmented HAPlotype Estimation and Imputation Tools version 4 (SHAPEIT4). SHAPEIT4 is a fast and accurate method for estimation of haplotypes (aka phasing) for SNP array and sequencing data.
This package provides example data to work with SHAPEIT4.
There are three methods to install shapeit4-example on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install shapeit4-example Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install shapeit4-example using apt-get by running the following command:
sudo apt-get -y install shapeit4-example
Install shapeit4-example Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install shapeit4-example using apt by running the following command:
sudo apt -y install shapeit4-example
Install shapeit4-example Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install shapeit4-example using aptitude by running the following command:
sudo aptitude -y install shapeit4-example
How To Uninstall shapeit4-example on Ubuntu 22.04
To uninstall only the shapeit4-example package we can use the following command:
sudo apt-get remove shapeit4-example
Uninstall shapeit4-example And Its Dependencies
To uninstall shapeit4-example and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove shapeit4-example
Remove shapeit4-example Configurations and Data
To remove shapeit4-example configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge shapeit4-example
Remove shapeit4-example configuration, data, and all of its dependencies
We can use the following command to remove shapeit4-example configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge shapeit4-example
References
Summary
In this tutorial we learn how to install shapeit4-example package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.
