How To Install r-bioc-seqlogo on Ubuntu 22.04
Introduction
In this tutorial we learn how to install r-bioc-seqlogo
on Ubuntu 22.04.
What is r-bioc-seqlogo
r-bioc-seqlogo is:
seqLogo takes the position weight matrix of a DNA sequence motif and plots the corresponding sequence logo as introduced by Schneider and Stephens (1990).
There are three methods to install r-bioc-seqlogo
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-seqlogo Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-seqlogo
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-seqlogo
Install r-bioc-seqlogo Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-seqlogo
using apt
by running the following command:
sudo apt -y install r-bioc-seqlogo
Install r-bioc-seqlogo Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-seqlogo
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-seqlogo
How To Uninstall r-bioc-seqlogo on Ubuntu 22.04
To uninstall only the r-bioc-seqlogo
package we can use the following command:
sudo apt-get remove r-bioc-seqlogo
Uninstall r-bioc-seqlogo And Its Dependencies
To uninstall r-bioc-seqlogo
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove r-bioc-seqlogo
Remove r-bioc-seqlogo Configurations and Data
To remove r-bioc-seqlogo
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge r-bioc-seqlogo
Remove r-bioc-seqlogo configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-seqlogo
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-seqlogo
References
Summary
In this tutorial we learn how to install r-bioc-seqlogo
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.