How To Install r-bioc-multiassayexperiment on Ubuntu 22.04

In this tutorial we learn how to install r-bioc-multiassayexperiment on Ubuntu 22.04. r-bioc-multiassayexperiment is Software for integrating multi-omics experiments in BioConductor

Introduction

In this tutorial we learn how to install r-bioc-multiassayexperiment on Ubuntu 22.04.

What is r-bioc-multiassayexperiment

r-bioc-multiassayexperiment is:

MultiAssayExperiment harmonizes data management of multiple assays performed on an overlapping set of specimens. It provides a familiar Bioconductor user experience by extending concepts from SummarizedExperiment, supporting an open-ended mix of standard data classes for individual assays, and allowing subsetting by genomic ranges or rownames.

There are three methods to install r-bioc-multiassayexperiment on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-multiassayexperiment Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-multiassayexperiment using apt-get by running the following command:

sudo apt-get -y install r-bioc-multiassayexperiment

Install r-bioc-multiassayexperiment Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-multiassayexperiment using apt by running the following command:

sudo apt -y install r-bioc-multiassayexperiment

Install r-bioc-multiassayexperiment Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-multiassayexperiment using aptitude by running the following command:

sudo aptitude -y install r-bioc-multiassayexperiment

How To Uninstall r-bioc-multiassayexperiment on Ubuntu 22.04

To uninstall only the r-bioc-multiassayexperiment package we can use the following command:

sudo apt-get remove r-bioc-multiassayexperiment

Uninstall r-bioc-multiassayexperiment And Its Dependencies

To uninstall r-bioc-multiassayexperiment and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:

sudo apt-get -y autoremove r-bioc-multiassayexperiment

Remove r-bioc-multiassayexperiment Configurations and Data

To remove r-bioc-multiassayexperiment configuration and data from Ubuntu 22.04 we can use the following command:

sudo apt-get -y purge r-bioc-multiassayexperiment

Remove r-bioc-multiassayexperiment configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-multiassayexperiment configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-multiassayexperiment

References

Summary

In this tutorial we learn how to install r-bioc-multiassayexperiment package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.