How To Install r-bioc-graph on Debian 9

In this tutorial we learn how to install r-bioc-graph on Debian 9. r-bioc-graph is handle graph data structures for BioConductor

Introduction

In this tutorial we learn how to install r-bioc-graph on Debian 9.

What is r-bioc-graph

r-bioc-graph is:

This BioConductor module implements some simple graph handling capabilities. These are for instance used in hypergraph module which in turn is used by several other BioConductor packages.

There are three methods to install r-bioc-graph on Debian 9. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-graph Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-graph using apt-get by running the following command:

sudo apt-get -y install r-bioc-graph

Install r-bioc-graph Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-graph using apt by running the following command:

sudo apt -y install r-bioc-graph

Install r-bioc-graph Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-graph using aptitude by running the following command:

sudo aptitude -y install r-bioc-graph

How To Uninstall r-bioc-graph on Debian 9

To uninstall only the r-bioc-graph package we can use the following command:

sudo apt-get remove r-bioc-graph

Uninstall r-bioc-graph And Its Dependencies

To uninstall r-bioc-graph and its dependencies that are no longer needed by Debian 9, we can use the command below:

sudo apt-get -y autoremove r-bioc-graph

Remove r-bioc-graph Configurations and Data

To remove r-bioc-graph configuration and data from Debian 9 we can use the following command:

sudo apt-get -y purge r-bioc-graph

Remove r-bioc-graph configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-graph configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-graph

Dependencies

r-bioc-graph have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-graph package on Debian 9 using different package management tools: apt, apt-get and aptitude.