How To Install q2-phylogeny on Ubuntu 22.04
Introduction
In this tutorial we learn how to install q2-phylogeny
on Ubuntu 22.04.
What is q2-phylogeny
q2-phylogeny is:
QIIME 2 plugin for phylogenetic reconstruction, and operations on phylogenetic trees.
There are three methods to install q2-phylogeny
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install q2-phylogeny Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install q2-phylogeny
using apt-get
by running the following command:
sudo apt-get -y install q2-phylogeny
Install q2-phylogeny Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install q2-phylogeny
using apt
by running the following command:
sudo apt -y install q2-phylogeny
Install q2-phylogeny Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install q2-phylogeny
using aptitude
by running the following command:
sudo aptitude -y install q2-phylogeny
How To Uninstall q2-phylogeny on Ubuntu 22.04
To uninstall only the q2-phylogeny
package we can use the following command:
sudo apt-get remove q2-phylogeny
Uninstall q2-phylogeny And Its Dependencies
To uninstall q2-phylogeny
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove q2-phylogeny
Remove q2-phylogeny Configurations and Data
To remove q2-phylogeny
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge q2-phylogeny
Remove q2-phylogeny configuration, data, and all of its dependencies
We can use the following command to remove q2-phylogeny
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge q2-phylogeny
References
Summary
In this tutorial we learn how to install q2-phylogeny
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.