How To Install python3-seqcluster on Ubuntu 22.04

In this tutorial we learn how to install python3-seqcluster on Ubuntu 22.04. python3-seqcluster is analysis of small RNA in NGS data

Introduction

In this tutorial we learn how to install python3-seqcluster on Ubuntu 22.04.

What is python3-seqcluster

python3-seqcluster is:

Identifies small RNA sequences of all sorts in RNA sequencing data. This is especially helpful for the identification of RNA that is neither coding nor belonging to the already well-established group of miRNA, towards many tools feel constrained to.

This package provides the Python module. For executables see the package ‘seqcluster’.

There are three methods to install python3-seqcluster on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-seqcluster Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-seqcluster using apt-get by running the following command:

sudo apt-get -y install python3-seqcluster

Install python3-seqcluster Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-seqcluster using apt by running the following command:

sudo apt -y install python3-seqcluster

Install python3-seqcluster Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-seqcluster using aptitude by running the following command:

sudo aptitude -y install python3-seqcluster

How To Uninstall python3-seqcluster on Ubuntu 22.04

To uninstall only the python3-seqcluster package we can use the following command:

sudo apt-get remove python3-seqcluster

Uninstall python3-seqcluster And Its Dependencies

To uninstall python3-seqcluster and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:

sudo apt-get -y autoremove python3-seqcluster

Remove python3-seqcluster Configurations and Data

To remove python3-seqcluster configuration and data from Ubuntu 22.04 we can use the following command:

sudo apt-get -y purge python3-seqcluster

Remove python3-seqcluster configuration, data, and all of its dependencies

We can use the following command to remove python3-seqcluster configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-seqcluster

References

Summary

In this tutorial we learn how to install python3-seqcluster package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.