How To Install profphd-net on Debian 11

In this tutorial we learn how to install profphd-net on Debian 11. profphd-net is neural network architecture for profphd

Introduction

In this tutorial we learn how to install profphd-net on Debian 11.

What is profphd-net

profphd-net is:

Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture.

This package contains the neural network architecture for profphd.

There are three methods to install profphd-net on Debian 11. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install profphd-net Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install profphd-net using apt-get by running the following command:

sudo apt-get -y install profphd-net

Install profphd-net Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install profphd-net using apt by running the following command:

sudo apt -y install profphd-net

Install profphd-net Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install profphd-net using aptitude by running the following command:

sudo aptitude -y install profphd-net

How To Uninstall profphd-net on Debian 11

To uninstall only the profphd-net package we can use the following command:

sudo apt-get remove profphd-net

Uninstall profphd-net And Its Dependencies

To uninstall profphd-net and its dependencies that are no longer needed by Debian 11, we can use the command below:

sudo apt-get -y autoremove profphd-net

Remove profphd-net Configurations and Data

To remove profphd-net configuration and data from Debian 11 we can use the following command:

sudo apt-get -y purge profphd-net

Remove profphd-net configuration, data, and all of its dependencies

We can use the following command to remove profphd-net configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge profphd-net

Dependencies

profphd-net have the following dependencies:

References

Summary

In this tutorial we learn how to install profphd-net package on Debian 11 using different package management tools: apt, apt-get and aptitude.