How To Install ntcard on Ubuntu 22.04
Introduction
In this tutorial we learn how to install ntcard
on Ubuntu 22.04.
What is ntcard
ntcard is:
As input it takes file(s) in fasta, fastq, sam, or bam formats and computes the total number of distinct k-mers, F0, and also the k-mer coverage frequency histogram, fi, i>=1.
There are three methods to install ntcard
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install ntcard Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install ntcard
using apt-get
by running the following command:
sudo apt-get -y install ntcard
Install ntcard Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install ntcard
using apt
by running the following command:
sudo apt -y install ntcard
Install ntcard Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install ntcard
using aptitude
by running the following command:
sudo aptitude -y install ntcard
How To Uninstall ntcard on Ubuntu 22.04
To uninstall only the ntcard
package we can use the following command:
sudo apt-get remove ntcard
Uninstall ntcard And Its Dependencies
To uninstall ntcard
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove ntcard
Remove ntcard Configurations and Data
To remove ntcard
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge ntcard
Remove ntcard configuration, data, and all of its dependencies
We can use the following command to remove ntcard
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge ntcard
References
Summary
In this tutorial we learn how to install ntcard
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.