How To Install massxpert-dbg on Debian 9

In this tutorial we learn how to install massxpert-dbg on Debian 9. massxpert-dbg is linear polymer mass spectrometry software - debugging symbols

Introduction

In this tutorial we learn how to install massxpert-dbg on Debian 9.

What is massxpert-dbg

massxpert-dbg is:

massXpert is a program to simulate and analyse mass spectrometric data obtained on linear (bio-)polymers. It is the successor of GNU polyxmass.

Four modules allow:

  • making brand new polymer chemistry definitions;
  • using the definitions to perform easy calculations in a desktop calculator-like manner;
  • performing sophisticated polymer sequence editing and simulations;
  • perform m/z list comparisons;

Chemical simulations encompass cleavage (either chemical or enzymatic), gas-phase fragmentations, chemical modification of any monomer in the polymer sequence, cross-linking of monomers in the sequence, arbitrary mass searches, calculation of the isotopic pattern…

This package provides the debugging symbols for massxpert.

There are three methods to install massxpert-dbg on Debian 9. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install massxpert-dbg Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install massxpert-dbg using apt-get by running the following command:

sudo apt-get -y install massxpert-dbg

Install massxpert-dbg Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install massxpert-dbg using apt by running the following command:

sudo apt -y install massxpert-dbg

Install massxpert-dbg Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install massxpert-dbg using aptitude by running the following command:

sudo aptitude -y install massxpert-dbg

How To Uninstall massxpert-dbg on Debian 9

To uninstall only the massxpert-dbg package we can use the following command:

sudo apt-get remove massxpert-dbg

Uninstall massxpert-dbg And Its Dependencies

To uninstall massxpert-dbg and its dependencies that are no longer needed by Debian 9, we can use the command below:

sudo apt-get -y autoremove massxpert-dbg

Remove massxpert-dbg Configurations and Data

To remove massxpert-dbg configuration and data from Debian 9 we can use the following command:

sudo apt-get -y purge massxpert-dbg

Remove massxpert-dbg configuration, data, and all of its dependencies

We can use the following command to remove massxpert-dbg configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge massxpert-dbg

Dependencies

massxpert-dbg have the following dependencies:

References

Summary

In this tutorial we learn how to install massxpert-dbg package on Debian 9 using different package management tools: apt, apt-get and aptitude.