How To Install libgkarrays1 on Kali Linux
Introduction
In this tutorial we learn how to install libgkarrays1
on Kali Linux.
What is libgkarrays1
libgkarrays1 is:
Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).
Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).
Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.
There are three methods to install libgkarrays1
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install libgkarrays1 Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install libgkarrays1
using apt-get
by running the following command:
sudo apt-get -y install libgkarrays1
Install libgkarrays1 Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install libgkarrays1
using apt
by running the following command:
sudo apt -y install libgkarrays1
Install libgkarrays1 Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install libgkarrays1
using aptitude
by running the following command:
sudo aptitude -y install libgkarrays1
How To Uninstall libgkarrays1 on Kali Linux
To uninstall only the libgkarrays1
package we can use the following command:
sudo apt-get remove libgkarrays1
Uninstall libgkarrays1 And Its Dependencies
To uninstall libgkarrays1
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove libgkarrays1
Remove libgkarrays1 Configurations and Data
To remove libgkarrays1
configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge libgkarrays1
Remove libgkarrays1 configuration, data, and all of its dependencies
We can use the following command to remove libgkarrays1
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge libgkarrays1
Dependencies
libgkarrays1 have the following dependencies:
References
Summary
In this tutorial we learn how to install libgkarrays1
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.