How To Install igdiscover-doc on Ubuntu 22.04

In this tutorial we learn how to install igdiscover-doc on Ubuntu 22.04. igdiscover-doc is analyzes antibody repertoires to find new V genes - doc

Introduction

In this tutorial we learn how to install igdiscover-doc on Ubuntu 22.04.

What is igdiscover-doc

igdiscover-doc is:

IgDiscover analyzes antibody repertoires and discovers new V genes from high-throughput sequencing reads. Heavy chains, kappa and lambda light chains are supported (to discover VH, VK and VL genes).

This is the common documentation package.

There are three methods to install igdiscover-doc on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install igdiscover-doc Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install igdiscover-doc using apt-get by running the following command:

sudo apt-get -y install igdiscover-doc

Install igdiscover-doc Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install igdiscover-doc using apt by running the following command:

sudo apt -y install igdiscover-doc

Install igdiscover-doc Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install igdiscover-doc using aptitude by running the following command:

sudo aptitude -y install igdiscover-doc

How To Uninstall igdiscover-doc on Ubuntu 22.04

To uninstall only the igdiscover-doc package we can use the following command:

sudo apt-get remove igdiscover-doc

Uninstall igdiscover-doc And Its Dependencies

To uninstall igdiscover-doc and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:

sudo apt-get -y autoremove igdiscover-doc

Remove igdiscover-doc Configurations and Data

To remove igdiscover-doc configuration and data from Ubuntu 22.04 we can use the following command:

sudo apt-get -y purge igdiscover-doc

Remove igdiscover-doc configuration, data, and all of its dependencies

We can use the following command to remove igdiscover-doc configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge igdiscover-doc

References

Summary

In this tutorial we learn how to install igdiscover-doc package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.