How To Install drop-seq-testdata on Ubuntu 22.04
Introduction
In this tutorial we learn how to install drop-seq-testdata on Ubuntu 22.04.
What is drop-seq-testdata
drop-seq-testdata is:
This software provide for core computational analysis of Drop-seq data, which shows you how to transform raw sequence data into an expression measurement for each gene in each individual cell.
This package provides the test data set included into the upstream source.
There are three methods to install drop-seq-testdata on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install drop-seq-testdata Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install drop-seq-testdata using apt-get by running the following command:
sudo apt-get -y install drop-seq-testdata
Install drop-seq-testdata Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install drop-seq-testdata using apt by running the following command:
sudo apt -y install drop-seq-testdata
Install drop-seq-testdata Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install drop-seq-testdata using aptitude by running the following command:
sudo aptitude -y install drop-seq-testdata
How To Uninstall drop-seq-testdata on Ubuntu 22.04
To uninstall only the drop-seq-testdata package we can use the following command:
sudo apt-get remove drop-seq-testdata
Uninstall drop-seq-testdata And Its Dependencies
To uninstall drop-seq-testdata and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove drop-seq-testdata
Remove drop-seq-testdata Configurations and Data
To remove drop-seq-testdata configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge drop-seq-testdata
Remove drop-seq-testdata configuration, data, and all of its dependencies
We can use the following command to remove drop-seq-testdata configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge drop-seq-testdata
References
Summary
In this tutorial we learn how to install drop-seq-testdata package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.
