How To Install clonalorigin on Ubuntu 22.04
Introduction
In this tutorial we learn how to install clonalorigin
on Ubuntu 22.04.
What is clonalorigin
clonalorigin is:
Bacteria, unlike us, can reproduce on their own. They do however have mechanisms that transfer DNA between organisms, a process more formally known as recombination. The mechanisms by which recombination takes place have been studied extensively in the laboratory but much remains to be understood concerning how, when and where recombination takes place within natural populations of bacteria and how it helps them to adapt to new environments. ClonalOrigin performs a comparative analysis of the sequences of a sample of bacterial genomes in order to reconstruct the recombination events that have taken place in their ancestry.
There are three methods to install clonalorigin
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install clonalorigin Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install clonalorigin
using apt-get
by running the following command:
sudo apt-get -y install clonalorigin
Install clonalorigin Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install clonalorigin
using apt
by running the following command:
sudo apt -y install clonalorigin
Install clonalorigin Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install clonalorigin
using aptitude
by running the following command:
sudo aptitude -y install clonalorigin
How To Uninstall clonalorigin on Ubuntu 22.04
To uninstall only the clonalorigin
package we can use the following command:
sudo apt-get remove clonalorigin
Uninstall clonalorigin And Its Dependencies
To uninstall clonalorigin
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove clonalorigin
Remove clonalorigin Configurations and Data
To remove clonalorigin
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge clonalorigin
Remove clonalorigin configuration, data, and all of its dependencies
We can use the following command to remove clonalorigin
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge clonalorigin
References
Summary
In this tutorial we learn how to install clonalorigin
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.