How To Install autodocksuite on Fedora 34
Introduction
In this tutorial we learn how to install autodocksuite on Fedora 34.
What is autodocksuite
AutoDock is a suite of automated docking tools. It is designed to predict \ how small molecules, such as substrates or drug candidates, bind to a \ receptor of known 3D structure. AutoDock 4 actually consists of two main \ programs describing the target protein; autogrid pre-calculates these grids. In \ addition to using them for docking, the atomic affinity grids can be \ visualized. This can help, for example, to guide organic synthetic chemists \ design better binders.
We can use yum or dnf to install autodocksuite on Fedora 34. In this tutorial we discuss both methods but you only need to choose one of method to install autodocksuite.
Install autodocksuite on Fedora 34 Using dnf
Update yum database with dnf using the following command.
sudo dnf makecache --refresh
The output should look something like this:
Fedora 34 - x86_64 20 kB/s | 6.6 kB 00:00
Fedora 34 openh264 (From Cisco) - x86_64 1.4 kB/s | 989 B 00:00
Fedora Modular 34 - x86_64 68 kB/s | 6.5 kB 00:00
Fedora 34 - x86_64 - Updates 3.5 kB/s | 6.2 kB 00:01
Fedora Modular 34 - x86_64 - Updates 17 kB/s | 5.9 kB 00:00
Metadata cache created.
After updating yum database, We can install autodocksuite using dnf by running the following command:
sudo dnf -y install autodocksuite
Install autodocksuite on Fedora 34 Using yum
Update yum database with yum using the following command.
sudo yum makecache --refresh
The output should look something like this:
Fedora 34 - x86_64 20 kB/s | 6.6 kB 00:00
Fedora 34 openh264 (From Cisco) - x86_64 1.4 kB/s | 989 B 00:00
Fedora Modular 34 - x86_64 68 kB/s | 6.5 kB 00:00
Fedora 34 - x86_64 - Updates 3.5 kB/s | 6.2 kB 00:01
Fedora Modular 34 - x86_64 - Updates 17 kB/s | 5.9 kB 00:00
Metadata cache created.
After updating yum database, We can install autodocksuite using yum by running the following command:
sudo yum -y install autodocksuite
How To Uninstall autodocksuite on Fedora 34
To uninstall only the autodocksuite package we can use the following command:
sudo dnf remove autodocksuite
autodocksuite Package Contents on Fedora 34
/usr/bin/autodock4
/usr/bin/autogrid4
/usr/lib/.build-id
/usr/lib/.build-id/17
/usr/lib/.build-id/17/42733a60db9ea45e25cf30de4fc21d0a3ceaa2
/usr/lib/.build-id/35
/usr/lib/.build-id/35/dd26195e151e72feba3801299430403fc4c295
/usr/share/licenses/autodocksuite
/usr/share/licenses/autodocksuite/COPYING
References
Summary
In this tutorial we learn how to install autodocksuite on Fedora 34 using yum and dnf.
