How To Install dnapi on Ubuntu 22.04
Introduction
In this tutorial we learn how to install dnapi on Ubuntu 22.04.
What is dnapi
dnapi is:
This package provides de novo adapter prediction (iterative) algorithm for small RNA sequencing data.
DNApi can predict most 3’ adapters correctly with the default parameters. You can tweak the parameters and can run different prediction modes.
There are three methods to install dnapi on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install dnapi Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install dnapi using apt-get by running the following command:
sudo apt-get -y install dnapi
Install dnapi Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install dnapi using apt by running the following command:
sudo apt -y install dnapi
Install dnapi Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install dnapi using aptitude by running the following command:
sudo aptitude -y install dnapi
How To Uninstall dnapi on Ubuntu 22.04
To uninstall only the dnapi package we can use the following command:
sudo apt-get remove dnapi
Uninstall dnapi And Its Dependencies
To uninstall dnapi and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove dnapi
Remove dnapi Configurations and Data
To remove dnapi configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge dnapi
Remove dnapi configuration, data, and all of its dependencies
We can use the following command to remove dnapi configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge dnapi
References
Summary
In this tutorial we learn how to install dnapi package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.
