How To Install neobio on Ubuntu 22.04

In this tutorial we learn how to install neobio on Ubuntu 22.04. neobio is computes alignments of amino acid and nucleotide sequences

Introduction

In this tutorial we learn how to install neobio on Ubuntu 22.04.

What is neobio

neobio is:

Library and graphical user interface for pairwise sequence alignments. Implementation of the dynamic programming methods of Needleman & Wunsch (global alignment) and Smith & Waterman (local alignment).

There are three methods to install neobio on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install neobio Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install neobio using apt-get by running the following command:

sudo apt-get -y install neobio

Install neobio Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install neobio using apt by running the following command:

sudo apt -y install neobio

Install neobio Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install neobio using aptitude by running the following command:

sudo aptitude -y install neobio

How To Uninstall neobio on Ubuntu 22.04

To uninstall only the neobio package we can use the following command:

sudo apt-get remove neobio

Uninstall neobio And Its Dependencies

To uninstall neobio and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:

sudo apt-get -y autoremove neobio

Remove neobio Configurations and Data

To remove neobio configuration and data from Ubuntu 22.04 we can use the following command:

sudo apt-get -y purge neobio

Remove neobio configuration, data, and all of its dependencies

We can use the following command to remove neobio configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge neobio

References

Summary

In this tutorial we learn how to install neobio package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.