How To Install fastqtl-doc on Kali Linux
Introduction
In this tutorial we learn how to install fastqtl-doc on Kali Linux.
What is fastqtl-doc
fastqtl-doc is:
The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.
This package provides documentation and example data to work with FastQTL.
There are three methods to install fastqtl-doc on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install fastqtl-doc Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install fastqtl-doc using apt-get by running the following command:
sudo apt-get -y install fastqtl-docInstall fastqtl-doc Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install fastqtl-doc using apt by running the following command:
sudo apt -y install fastqtl-docInstall fastqtl-doc Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install fastqtl-doc using aptitude by running the following command:
sudo aptitude -y install fastqtl-docHow To Uninstall fastqtl-doc on Kali Linux
To uninstall only the fastqtl-doc package we can use the following command:
sudo apt-get remove fastqtl-docUninstall fastqtl-doc And Its Dependencies
To uninstall fastqtl-doc and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove fastqtl-docRemove fastqtl-doc Configurations and Data
To remove fastqtl-doc configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge fastqtl-docRemove fastqtl-doc configuration, data, and all of its dependencies
We can use the following command to remove fastqtl-doc configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge fastqtl-docDependencies
fastqtl-doc have the following dependencies:
References
Summary
In this tutorial we learn how to install fastqtl-doc package on Kali Linux using different package management tools: apt, apt-get and aptitude.
