How To Install wham-align on Ubuntu 20.04
Introduction
In this tutorial we learn how to install wham-align
on Ubuntu 20.04.
What is wham-align
wham-align is:
This package provides functionality analogous to BWA or bowtie in aligning reads from next-generation DNA sequencing machines against a reference genome.
There are three methods to install wham-align
on Ubuntu 20.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install wham-align Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install wham-align
using apt-get
by running the following command:
sudo apt-get -y install wham-align
Install wham-align Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install wham-align
using apt
by running the following command:
sudo apt -y install wham-align
Install wham-align Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install wham-align
using aptitude
by running the following command:
sudo aptitude -y install wham-align
How To Uninstall wham-align on Ubuntu 20.04
To uninstall only the wham-align
package we can use the following command:
sudo apt-get remove wham-align
Uninstall wham-align And Its Dependencies
To uninstall wham-align
and its dependencies that are no longer needed by Ubuntu 20.04, we can use the command below:
sudo apt-get -y autoremove wham-align
Remove wham-align Configurations and Data
To remove wham-align
configuration and data from Ubuntu 20.04 we can use the following command:
sudo apt-get -y purge wham-align
Remove wham-align configuration, data, and all of its dependencies
We can use the following command to remove wham-align
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge wham-align
References
Summary
In this tutorial we learn how to install wham-align
package on Ubuntu 20.04 using different package management tools: apt
, apt-get
and aptitude
.