How To Install vcftools on CentOS 7

In this tutorial we learn how to install vcftools on CentOS 7. vcftools is VCF file manipulation tools

Introduction

In this tutorial we learn how to install vcftools on CentOS 7.

What is vcftools

A program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to provide methods for working with VCF files merging, comparing and calculate some basic population genetic statistics.

We can use yum or dnf to install vcftools on CentOS 7. In this tutorial we discuss both methods but you only need to choose one of method to install vcftools.

Install vcftools on CentOS 7 Using yum

Update yum database with yum using the following command.

sudo yum makecache

After updating yum database, We can install vcftools using yum by running the following command:

sudo yum -y install vcftools

Install vcftools on CentOS 7 Using dnf

If you don’t have dnf installed you can install DNF on CentOS 7 first. Update yum database with dnf using the following command.

sudo dnf makecache

After updating yum database, We can install vcftools using dnf by running the following command:

sudo dnf -y install vcftools

How To Uninstall vcftools on CentOS 7

To uninstall only the vcftools package we can use the following command:

sudo dnf remove vcftools

References

Summary

In this tutorial we learn how to install vcftools on CentOS 7 using yum and dnf.