How To Install uncalled on Kali Linux

In this tutorial we learn how to install uncalled on Kali Linux. uncalled is Utility for Nanopore Current Alignment to Large Expanses of DNA

Introduction

In this tutorial we learn how to install uncalled on Kali Linux.

What is uncalled

uncalled is:

Streaming algorithm for mapping raw nanopore signal to DNA references

Enables real-time enrichment or depletion on Oxford Nanopore Technologies (ONT) MinION runs via ReadUntil.

Also supports standalone signal mapping of fast5 reads

There are three methods to install uncalled on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install uncalled Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install uncalled using apt-get by running the following command:

sudo apt-get -y install uncalled

Install uncalled Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install uncalled using apt by running the following command:

sudo apt -y install uncalled

Install uncalled Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install uncalled using aptitude by running the following command:

sudo aptitude -y install uncalled

How To Uninstall uncalled on Kali Linux

To uninstall only the uncalled package we can use the following command:

sudo apt-get remove uncalled

Uninstall uncalled And Its Dependencies

To uninstall uncalled and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove uncalled

Remove uncalled Configurations and Data

To remove uncalled configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge uncalled

Remove uncalled configuration, data, and all of its dependencies

We can use the following command to remove uncalled configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge uncalled

Dependencies

uncalled have the following dependencies:

References

Summary

In this tutorial we learn how to install uncalled package on Kali Linux using different package management tools: apt, apt-get and aptitude.