How To Install transrate-tools on Debian 9
Introduction
In this tutorial we learn how to install transrate-tools
on Debian 9.
What is transrate-tools
transrate-tools is:
Transrate is a library and command-line tool for quality assessment of de-novo transcriptome assemblies.
This package provides command line tools used by transrate to process BAM files.
There are three methods to install transrate-tools
on Debian 9. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install transrate-tools Using apt-get
Update apt database with apt-get
using the following command.
After updating apt database, We can install transrate-tools
using apt-get
by running the following command:
Install transrate-tools Using apt
Update apt database with apt
using the following command.
After updating apt database, We can install transrate-tools
using apt
by running the following command:
Install transrate-tools Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
After updating apt database, We can install transrate-tools
using aptitude
by running the following command:
How To Uninstall transrate-tools on Debian 9
To uninstall only the transrate-tools
package we can use the following command:
Uninstall transrate-tools And Its Dependencies
To uninstall transrate-tools
and its dependencies that are no longer needed by Debian 9, we can use the command below:
Remove transrate-tools Configurations and Data
To remove transrate-tools
configuration and data from Debian 9 we can use the following command:
Remove transrate-tools configuration, data, and all of its dependencies
We can use the following command to remove transrate-tools
configurations, data and all of its dependencies, we can use the following command:
Dependencies
transrate-tools have the following dependencies:
References
Summary
In this tutorial we learn how to install transrate-tools
package on Debian 9 using different package management tools: apt
, apt-get
and aptitude
.