How To Install tombo-doc on Kali Linux

In this tutorial we learn how to install tombo-doc on Kali Linux. tombo-doc is identification of modified nucleotides from raw nanopore sequencing data (doc)

Introduction

In this tutorial we learn how to install tombo-doc on Kali Linux.

What is tombo-doc

tombo-doc is:

Tombo is a suite of tools primarily for the identification of modified nucleotides from nanopore sequencing data. Tombo also provides tools for the analysis and visualization of raw nanopore signal.

This package contains the documentation for tombo.

There are three methods to install tombo-doc on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install tombo-doc Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install tombo-doc using apt-get by running the following command:

sudo apt-get -y install tombo-doc

Install tombo-doc Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install tombo-doc using apt by running the following command:

sudo apt -y install tombo-doc

Install tombo-doc Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install tombo-doc using aptitude by running the following command:

sudo aptitude -y install tombo-doc

How To Uninstall tombo-doc on Kali Linux

To uninstall only the tombo-doc package we can use the following command:

sudo apt-get remove tombo-doc

Uninstall tombo-doc And Its Dependencies

To uninstall tombo-doc and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove tombo-doc

Remove tombo-doc Configurations and Data

To remove tombo-doc configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge tombo-doc

Remove tombo-doc configuration, data, and all of its dependencies

We can use the following command to remove tombo-doc configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge tombo-doc

Dependencies

tombo-doc have the following dependencies:

References

Summary

In this tutorial we learn how to install tombo-doc package on Kali Linux using different package management tools: apt, apt-get and aptitude.