How To Install threeb-imagej on Debian 12

Learn how to install threeb-imagej on Debian 12 with this tutorial. threeb-imagej is 3B Microscopy Analysis Software - ImageJ plugin

Introduction

In this tutorial we learn how to install threeb-imagej on Debian 12.

What is threeb-imagej

threeb-imagej is:

Bayesian analysis of blinking and bleaching, or 3B microscopy, is a method which analyses data in which many overlapping fluorophores undergo bleaching and blinking events, giving the structure at enhanced resolution. By using a Hidden Markov Model (HMM), it allows useful information to be obtained from data that would be impossible to analyse with standard localisation analysis techniques.

This package contains the ImageJ plugin.

There are three methods to install threeb-imagej on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install threeb-imagej Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install threeb-imagej using apt-get by running the following command:

sudo apt-get -y install threeb-imagej

Install threeb-imagej Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install threeb-imagej using apt by running the following command:

sudo apt -y install threeb-imagej

Install threeb-imagej Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install threeb-imagej using aptitude by running the following command:

sudo aptitude -y install threeb-imagej

How To Uninstall threeb-imagej on Debian 12

To uninstall only the threeb-imagej package we can use the following command:

sudo apt-get remove threeb-imagej

Uninstall threeb-imagej And Its Dependencies

To uninstall threeb-imagej and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove threeb-imagej

Remove threeb-imagej Configurations and Data

To remove threeb-imagej configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge threeb-imagej

Remove threeb-imagej configuration, data, and all of its dependencies

We can use the following command to remove threeb-imagej configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge threeb-imagej

Dependencies

threeb-imagej have the following dependencies:

References

Summary

In this tutorial we learn how to install threeb-imagej package on Debian 12 using different package management tools: apt, apt-get and aptitude.