How To Install terraphast on Debian 12

Learn how to install terraphast on Debian 12 with this tutorial. terraphast is enumerate terraces in phylogenetic tree space

Introduction

In this tutorial we learn how to install terraphast on Debian 12.

What is terraphast

terraphast is:

Terraphast takes a .nkw file in Newick format and a genes/sites file, which denotes whether (1) or not (0) gene i is present in species j.

Program output states some imput data properties, the species whose leaf edge is used as a new tree root, and the resulting supertree in compressed newick format.

There are three methods to install terraphast on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install terraphast Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install terraphast using apt-get by running the following command:

sudo apt-get -y install terraphast

Install terraphast Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install terraphast using apt by running the following command:

sudo apt -y install terraphast

Install terraphast Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install terraphast using aptitude by running the following command:

sudo aptitude -y install terraphast

How To Uninstall terraphast on Debian 12

To uninstall only the terraphast package we can use the following command:

sudo apt-get remove terraphast

Uninstall terraphast And Its Dependencies

To uninstall terraphast and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove terraphast

Remove terraphast Configurations and Data

To remove terraphast configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge terraphast

Remove terraphast configuration, data, and all of its dependencies

We can use the following command to remove terraphast configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge terraphast

Dependencies

terraphast have the following dependencies:

References

Summary

In this tutorial we learn how to install terraphast package on Debian 12 using different package management tools: apt, apt-get and aptitude.