How To Install surankco on Kali Linux

In this tutorial we learn how to install surankco on Kali Linux. surankco is Supervised Ranking of Contigs in de novo Assemblies

Introduction

In this tutorial we learn how to install surankco on Kali Linux.

What is surankco

surankco is:

SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet.

There are three methods to install surankco on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install surankco Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install surankco using apt-get by running the following command:

sudo apt-get -y install surankco

Install surankco Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install surankco using apt by running the following command:

sudo apt -y install surankco

Install surankco Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install surankco using aptitude by running the following command:

sudo aptitude -y install surankco

How To Uninstall surankco on Kali Linux

To uninstall only the surankco package we can use the following command:

sudo apt-get remove surankco

Uninstall surankco And Its Dependencies

To uninstall surankco and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove surankco

Remove surankco Configurations and Data

To remove surankco configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge surankco

Remove surankco configuration, data, and all of its dependencies

We can use the following command to remove surankco configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge surankco

Dependencies

surankco have the following dependencies:

References

Summary

In this tutorial we learn how to install surankco package on Kali Linux using different package management tools: apt, apt-get and aptitude.