How To Install surankco on Debian 9
Introduction
In this tutorial we learn how to install surankco on Debian 9.
What is surankco
surankco is:
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet.
There are three methods to install surankco on Debian 9. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install surankco Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install surankco using apt-get by running the following command:
sudo apt-get -y install surankco
Install surankco Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install surankco using apt by running the following command:
sudo apt -y install surankco
Install surankco Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install surankco using aptitude by running the following command:
sudo aptitude -y install surankco
How To Uninstall surankco on Debian 9
To uninstall only the surankco package we can use the following command:
sudo apt-get remove surankco
Uninstall surankco And Its Dependencies
To uninstall surankco and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove surankco
Remove surankco Configurations and Data
To remove surankco configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge surankco
Remove surankco configuration, data, and all of its dependencies
We can use the following command to remove surankco configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge surankco
Dependencies
surankco have the following dependencies:
References
Summary
In this tutorial we learn how to install surankco package on Debian 9 using different package management tools: apt, apt-get and aptitude.