How To Install shovill-examples on Debian 12
Introduction
In this tutorial we learn how to install shovill-examples on Debian 12.
What is shovill-examples
shovill-examples is:
Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other assemblers like SKESA, Velvet and Megahit, so you can take advantage of the pre- and post-processing the Shovill provides with those too.
This package contains a test data which can be used to test the package.
There are three methods to install shovill-examples on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install shovill-examples Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install shovill-examples using apt-get by running the following command:
sudo apt-get -y install shovill-examples
Install shovill-examples Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install shovill-examples using apt by running the following command:
sudo apt -y install shovill-examples
Install shovill-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install shovill-examples using aptitude by running the following command:
sudo aptitude -y install shovill-examples
How To Uninstall shovill-examples on Debian 12
To uninstall only the shovill-examples package we can use the following command:
sudo apt-get remove shovill-examples
Uninstall shovill-examples And Its Dependencies
To uninstall shovill-examples and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove shovill-examples
Remove shovill-examples Configurations and Data
To remove shovill-examples configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge shovill-examples
Remove shovill-examples configuration, data, and all of its dependencies
We can use the following command to remove shovill-examples configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge shovill-examples
Dependencies
shovill-examples have the following dependencies:
References
Summary
In this tutorial we learn how to install shovill-examples package on Debian 12 using different package management tools: apt, apt-get and aptitude.
