How To Install seqkit-examples on Debian 12
Introduction
In this tutorial we learn how to install seqkit-examples on Debian 12.
What is seqkit-examples
seqkit-examples is:
SeqKit describes a cross-platform ultrafast comprehensive toolkit for FASTA/Q processing. SeqKit provides executable binary files for all major operating systems, including Windows, Linux, and Mac OS X, and can be directly used without any dependencies or pre-configurations. SeqKit demonstrates competitive performance in execution time and memory usage compared to similar tools. The efficiency and usability of SeqKit enable researchers to rapidly accomplish common FASTA/Q file manipulations.
This package contains a test data set as well as sample scripts running some test suite provided by Debian also as autopkgtest.
There are three methods to install seqkit-examples on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install seqkit-examples Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install seqkit-examples using apt-get by running the following command:
sudo apt-get -y install seqkit-examples
Install seqkit-examples Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install seqkit-examples using apt by running the following command:
sudo apt -y install seqkit-examples
Install seqkit-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install seqkit-examples using aptitude by running the following command:
sudo aptitude -y install seqkit-examples
How To Uninstall seqkit-examples on Debian 12
To uninstall only the seqkit-examples package we can use the following command:
sudo apt-get remove seqkit-examples
Uninstall seqkit-examples And Its Dependencies
To uninstall seqkit-examples and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove seqkit-examples
Remove seqkit-examples Configurations and Data
To remove seqkit-examples configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge seqkit-examples
Remove seqkit-examples configuration, data, and all of its dependencies
We can use the following command to remove seqkit-examples configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge seqkit-examples
Dependencies
seqkit-examples have the following dependencies:
References
Summary
In this tutorial we learn how to install seqkit-examples package on Debian 12 using different package management tools: apt, apt-get and aptitude.
