How To Install relion-bin on Debian 9
Introduction
In this tutorial we learn how to install relion-bin
on Debian 9.
What is relion-bin
relion-bin is:
RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy.
RELION provides a GUI, several command-line tools in parallel (MPI) and serial versions as well as a C++ API.
relion-bin provides the serial command-line tools
There are three methods to install relion-bin
on Debian 9. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install relion-bin Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install relion-bin
using apt-get
by running the following command:
sudo apt-get -y install relion-bin
Install relion-bin Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install relion-bin
using apt
by running the following command:
sudo apt -y install relion-bin
Install relion-bin Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install relion-bin
using aptitude
by running the following command:
sudo aptitude -y install relion-bin
How To Uninstall relion-bin on Debian 9
To uninstall only the relion-bin
package we can use the following command:
sudo apt-get remove relion-bin
Uninstall relion-bin And Its Dependencies
To uninstall relion-bin
and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove relion-bin
Remove relion-bin Configurations and Data
To remove relion-bin
configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge relion-bin
Remove relion-bin configuration, data, and all of its dependencies
We can use the following command to remove relion-bin
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge relion-bin
Dependencies
relion-bin have the following dependencies:
References
Summary
In this tutorial we learn how to install relion-bin
package on Debian 9 using different package management tools: apt
, apt-get
and aptitude
.