How To Install rate4site on Kali Linux
Introduction
In this tutorial we learn how to install rate4site
on Kali Linux.
What is rate4site
rate4site is:
Rate4Site calculates the relative evolutionary rate at each site using a probabilistic-based evolutionary model. This allows taking into account the stochastic process underlying sequence evolution within protein families and the phylogenetic tree of the proteins in the family. The conservation score at a site corresponds to the site’s evolutionary rate.
There are three methods to install rate4site
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install rate4site Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install rate4site
using apt-get
by running the following command:
sudo apt-get -y install rate4site
Install rate4site Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install rate4site
using apt
by running the following command:
sudo apt -y install rate4site
Install rate4site Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install rate4site
using aptitude
by running the following command:
sudo aptitude -y install rate4site
How To Uninstall rate4site on Kali Linux
To uninstall only the rate4site
package we can use the following command:
sudo apt-get remove rate4site
Uninstall rate4site And Its Dependencies
To uninstall rate4site
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove rate4site
Remove rate4site Configurations and Data
To remove rate4site
configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge rate4site
Remove rate4site configuration, data, and all of its dependencies
We can use the following command to remove rate4site
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge rate4site
Dependencies
rate4site have the following dependencies:
References
Summary
In this tutorial we learn how to install rate4site
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.