How To Install r-other-kcha-psiplot on Debian 12
Introduction
In this tutorial we learn how to install r-other-kcha-psiplot on Debian 12.
What is r-other-kcha-psiplot
r-other-kcha-psiplot is:
Provides functions to create plots of PSI values of alternatively-spliced exons or cRPKMs. Requires PSI cRPKM data generated by the program vast-tools (https://github.com/vastgroup/vast-tools).
There are three methods to install r-other-kcha-psiplot on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-other-kcha-psiplot Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-other-kcha-psiplot using apt-get by running the following command:
sudo apt-get -y install r-other-kcha-psiplot
Install r-other-kcha-psiplot Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-other-kcha-psiplot using apt by running the following command:
sudo apt -y install r-other-kcha-psiplot
Install r-other-kcha-psiplot Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-other-kcha-psiplot using aptitude by running the following command:
sudo aptitude -y install r-other-kcha-psiplot
How To Uninstall r-other-kcha-psiplot on Debian 12
To uninstall only the r-other-kcha-psiplot package we can use the following command:
sudo apt-get remove r-other-kcha-psiplot
Uninstall r-other-kcha-psiplot And Its Dependencies
To uninstall r-other-kcha-psiplot and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-other-kcha-psiplot
Remove r-other-kcha-psiplot Configurations and Data
To remove r-other-kcha-psiplot configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-other-kcha-psiplot
Remove r-other-kcha-psiplot configuration, data, and all of its dependencies
We can use the following command to remove r-other-kcha-psiplot configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-other-kcha-psiplot
Dependencies
r-other-kcha-psiplot have the following dependencies:
- r-base-core
- r-api-4.0
- r-cran-mass
- r-cran-dplyr
- r-cran-tidyr
- r-cran-purrr
- r-cran-readr
- r-cran-magrittr
- r-cran-ggplot2
References
Summary
In this tutorial we learn how to install r-other-kcha-psiplot package on Debian 12 using different package management tools: apt, apt-get and aptitude.
