How To Install r-cran-treescape on Kali Linux
Introduction
In this tutorial we learn how to install r-cran-treescape on Kali Linux.
What is r-cran-treescape
r-cran-treescape is:
This GNU R package provides tools for the exploration of distributions of phylogenetic trees. This package includes a shiny interface which can be started from R using ’treescapeServer()'.
There are three methods to install r-cran-treescape on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-treescape Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-cran-treescape using apt-get by running the following command:
sudo apt-get -y install r-cran-treescapeInstall r-cran-treescape Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-cran-treescape using apt by running the following command:
sudo apt -y install r-cran-treescapeInstall r-cran-treescape Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-cran-treescape using aptitude by running the following command:
sudo aptitude -y install r-cran-treescapeHow To Uninstall r-cran-treescape on Kali Linux
To uninstall only the r-cran-treescape package we can use the following command:
sudo apt-get remove r-cran-treescapeUninstall r-cran-treescape And Its Dependencies
To uninstall r-cran-treescape and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-cran-treescapeRemove r-cran-treescape Configurations and Data
To remove r-cran-treescape configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-cran-treescapeRemove r-cran-treescape configuration, data, and all of its dependencies
We can use the following command to remove r-cran-treescape configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-treescapeDependencies
r-cran-treescape have the following dependencies:
- r-base-core
- r-api-4.0
- r-cran-ape
- r-cran-ade4
- r-cran-adegenet
- r-cran-adegraphics
- r-cran-adephylo
- r-cran-combinat
- r-cran-distory
- r-cran-fields
- r-cran-htmlwidgets
- r-cran-mass
- r-cran-phangorn
- r-cran-rcpp
- r-cran-rgl
- r-cran-rlumshiny
- r-cran-scatterd3
- r-cran-shiny
- r-cran-shinybs
- libc6
- libgcc-s1
- libstdc++6
References
Summary
In this tutorial we learn how to install r-cran-treescape package on Kali Linux using different package management tools: apt, apt-get and aptitude.