How To Install r-cran-tfmpvalue on Ubuntu 22.04
Introduction
In this tutorial we learn how to install r-cran-tfmpvalue on Ubuntu 22.04.
What is r-cran-tfmpvalue
r-cran-tfmpvalue is:
In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, it is interesting to obtain the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. This package is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.
There are three methods to install r-cran-tfmpvalue on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-tfmpvalue Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-tfmpvalue using apt-get by running the following command:
sudo apt-get -y install r-cran-tfmpvalue
Install r-cran-tfmpvalue Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-tfmpvalue using apt by running the following command:
sudo apt -y install r-cran-tfmpvalue
Install r-cran-tfmpvalue Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-tfmpvalue using aptitude by running the following command:
sudo aptitude -y install r-cran-tfmpvalue
How To Uninstall r-cran-tfmpvalue on Ubuntu 22.04
To uninstall only the r-cran-tfmpvalue package we can use the following command:
sudo apt-get remove r-cran-tfmpvalue
Uninstall r-cran-tfmpvalue And Its Dependencies
To uninstall r-cran-tfmpvalue and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove r-cran-tfmpvalue
Remove r-cran-tfmpvalue Configurations and Data
To remove r-cran-tfmpvalue configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge r-cran-tfmpvalue
Remove r-cran-tfmpvalue configuration, data, and all of its dependencies
We can use the following command to remove r-cran-tfmpvalue configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-tfmpvalue
References
Summary
In this tutorial we learn how to install r-cran-tfmpvalue package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.