How To Install r-cran-taxize on Debian 9
Introduction
In this tutorial we learn how to install r-cran-taxize
on Debian 9.
What is r-cran-taxize
r-cran-taxize is:
GNU R package to interact with a suite of web ‘APIs’ for taxonomic tasks, such as verifying species names, and getting taxonomic ‘hierarchies’.
There are three methods to install r-cran-taxize
on Debian 9. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-cran-taxize Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-taxize
using apt-get
by running the following command:
sudo apt-get -y install r-cran-taxize
Install r-cran-taxize Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-cran-taxize
using apt
by running the following command:
sudo apt -y install r-cran-taxize
Install r-cran-taxize Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-taxize
using aptitude
by running the following command:
sudo aptitude -y install r-cran-taxize
How To Uninstall r-cran-taxize on Debian 9
To uninstall only the r-cran-taxize
package we can use the following command:
sudo apt-get remove r-cran-taxize
Uninstall r-cran-taxize And Its Dependencies
To uninstall r-cran-taxize
and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove r-cran-taxize
Remove r-cran-taxize Configurations and Data
To remove r-cran-taxize
configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge r-cran-taxize
Remove r-cran-taxize configuration, data, and all of its dependencies
We can use the following command to remove r-cran-taxize
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-taxize
Dependencies
r-cran-taxize have the following dependencies:
- r-base-core
- r-api-3
- r-cran-httr
- r-cran-xml2
- r-cran-jsonlite
- r-cran-reshape2
- r-cran-stringr
- r-cran-plyr
- r-cran-foreach
- r-cran-ape
- r-cran-bold
- r-cran-data.table
- r-cran-rredlist
- r-cran-rotl
- r-cran-ritis
- r-cran-tibble
References
Summary
In this tutorial we learn how to install r-cran-taxize
package on Debian 9 using different package management tools: apt
, apt-get
and aptitude
.