How To Install r-cran-susier on Debian 12

Learn how to install r-cran-susier on Debian 12 with this tutorial. r-cran-susier is GNU R sum of single effects linear regression

Introduction

In this tutorial we learn how to install r-cran-susier on Debian 12.

What is `r-cran-susier`

r-cran-susier is:

Implements methods for variable selection in linear regression based on the “Sum of Single Effects” (SuSiE) model, as described in Wang et al (2020) DOI:10.1101/501114. These methods provide simple summaries, called “Credible Sets”, for accurately quantifying uncertainty in which variables should be selected. The methods are motivated by genetic fine-mapping applications, and are particularly well-suited to settings where variables are highly correlated and detectable effects are sparse. The fitting algorithm, a Bayesian analogue of stepwise selection methods called “Iterative Bayesian Stepwise Selection” (IBSS), is simple and fast, allowing the SuSiE model be fit to large data sets (thousands of samples and hundreds of thousands of variables).

There are three methods to install r-cran-susier on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-cran-susier Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-cran-susier using apt-get by running the following command:

sudo apt-get -y install r-cran-susier

Install r-cran-susier Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-cran-susier using apt by running the following command:

sudo apt -y install r-cran-susier

Install r-cran-susier Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-cran-susier using aptitude by running the following command:

sudo aptitude -y install r-cran-susier

How To Uninstall r-cran-susier on Debian 12

To uninstall only the r-cran-susier package we can use the following command:

sudo apt-get remove r-cran-susier

Uninstall r-cran-susier And Its Dependencies

To uninstall r-cran-susier and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove r-cran-susier

Remove r-cran-susier Configurations and Data

To remove r-cran-susier configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge r-cran-susier

Remove r-cran-susier configuration, data, and all of its dependencies

We can use the following command to remove r-cran-susier configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-cran-susier

Dependencies

r-cran-susier have the following dependencies:

References

Summary

In this tutorial we learn how to install r-cran-susier package on Debian 12 using different package management tools: apt, apt-get and aptitude.