How To Install r-cran-spatstat.core on Debian 12
Introduction
In this tutorial we learn how to install r-cran-spatstat.core on Debian 12.
What is r-cran-spatstat.core
r-cran-spatstat.core is:
Functionality for data analysis and modelling of spatial data, mainly spatial point patterns, in the ‘spatstat’ family of packages. (Excludes analysis of spatial data on a linear network, which is covered by the separate package ‘spatstat.linnet’.) Exploratory methods include quadrat counts, K-functions and their simulation envelopes, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross- validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics, and kernel estimates of covariate effects. Formal hypothesis tests of random pattern (chi-squared, Kolmogorov- Smirnov, Monte Carlo, Diggle-Cressie-Loosmore-Ford, Dao-Genton, two- stage Monte Carlo) and tests for covariate effects (Cox-Berman-Waller- Lawson, Kolmogorov-Smirnov, ANOVA) are also supported. Parametric models can be fitted to point pattern data using the functions ppm(), kppm(), slrm(), dppm() similar to glm(). Types of models include Poisson, Gibbs and Cox point processes, Neyman-Scott cluster processes, and determinantal point processes. Models may involve dependence on covariates, inter-point interaction, cluster formation and dependence on marks. Models are fitted by maximum likelihood, logistic regression, minimum contrast, and composite likelihood methods. A model can be fitted to a list of point patterns (replicated point pattern data) using the function mppm(). The model can include random effects and fixed effects depending on the experimental design, in addition to all the features listed above. Fitted point process models can be simulated, automatically. Formal hypothesis tests of a fitted model are supported (likelihood ratio test, analysis of deviance, Monte Carlo tests) along with basic tools for model selection (stepwise(), AIC()) and variable selection (sdr). Tools for validating the fitted model include simulation envelopes, residuals, residual plots and Q-Q plots, leverage and influence diagnostics, partial residuals, and added variable plots.
There are three methods to install r-cran-spatstat.core on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-spatstat.core Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-spatstat.core using apt-get by running the following command:
sudo apt-get -y install r-cran-spatstat.core
Install r-cran-spatstat.core Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-spatstat.core using apt by running the following command:
sudo apt -y install r-cran-spatstat.core
Install r-cran-spatstat.core Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-spatstat.core using aptitude by running the following command:
sudo aptitude -y install r-cran-spatstat.core
How To Uninstall r-cran-spatstat.core on Debian 12
To uninstall only the r-cran-spatstat.core package we can use the following command:
sudo apt-get remove r-cran-spatstat.core
Uninstall r-cran-spatstat.core And Its Dependencies
To uninstall r-cran-spatstat.core and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-cran-spatstat.core
Remove r-cran-spatstat.core Configurations and Data
To remove r-cran-spatstat.core configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-cran-spatstat.core
Remove r-cran-spatstat.core configuration, data, and all of its dependencies
We can use the following command to remove r-cran-spatstat.core configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-spatstat.core
Dependencies
r-cran-spatstat.core have the following dependencies:
- r-base-core
- r-api-4.0
- r-cran-spatstat.data
- r-cran-spatstat.geom
- r-cran-spatstat.random
- r-cran-nlme
- r-cran-rpart
- r-cran-spatstat.utils
- r-cran-spatstat.sparse
- r-cran-mgcv
- r-cran-matrix
- r-cran-abind
- r-cran-tensor
- r-cran-goftest
- libc6
References
Summary
In this tutorial we learn how to install r-cran-spatstat.core package on Debian 12 using different package management tools: apt, apt-get and aptitude.
