How To Install r-cran-rsgcc on Kali Linux

In this tutorial we learn how to install r-cran-rsgcc on Kali Linux. r-cran-rsgcc is Gini correlation and clustering of gene expression data

Introduction

In this tutorial we learn how to install r-cran-rsgcc on Kali Linux.

What is r-cran-rsgcc

r-cran-rsgcc is:

This package provides functions for calculating associations between two genes with five correlation methods(e.g., the Gini correlation coefficient [GCC], the Pearson’s product moment correlation coefficient [PCC], the Kendall tau rank correlation coefficient [KCC], the Spearman’s rank correlation coefficient [SCC] and the Tukey’s biweight correlation coefficient [BiWt], and three non-correlation methods (e.g., mutual information [MI] and the maximal information-based nonparametric exploration [MINE], and the euclidean distance [ED]). It can also been implemented to perform the correlation and clustering analysis of transcriptomic data profiled by microarray and RNA-Seq technologies. Additionally, this package can be further applied to construct gene co-expression networks (GCNs).

There are three methods to install r-cran-rsgcc on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-cran-rsgcc Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-cran-rsgcc using apt-get by running the following command:

sudo apt-get -y install r-cran-rsgcc

Install r-cran-rsgcc Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-cran-rsgcc using apt by running the following command:

sudo apt -y install r-cran-rsgcc

Install r-cran-rsgcc Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-cran-rsgcc using aptitude by running the following command:

sudo aptitude -y install r-cran-rsgcc

How To Uninstall r-cran-rsgcc on Kali Linux

To uninstall only the r-cran-rsgcc package we can use the following command:

sudo apt-get remove r-cran-rsgcc

Uninstall r-cran-rsgcc And Its Dependencies

To uninstall r-cran-rsgcc and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-cran-rsgcc

Remove r-cran-rsgcc Configurations and Data

To remove r-cran-rsgcc configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-cran-rsgcc

Remove r-cran-rsgcc configuration, data, and all of its dependencies

We can use the following command to remove r-cran-rsgcc configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-cran-rsgcc

Dependencies

r-cran-rsgcc have the following dependencies:

References

Summary

In this tutorial we learn how to install r-cran-rsgcc package on Kali Linux using different package management tools: apt, apt-get and aptitude.