How To Install r-cran-phylobase on Debian 12
Introduction
In this tutorial we learn how to install r-cran-phylobase on Debian 12.
What is r-cran-phylobase
r-cran-phylobase is:
This R package provides a base S4 class for comparative methods, incorporating one or more trees and trait data as these are used in other packages dealing with phylogenetic structures and comparative data.
There are three methods to install r-cran-phylobase on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-phylobase Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-phylobase using apt-get by running the following command:
sudo apt-get -y install r-cran-phylobase
Install r-cran-phylobase Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-phylobase using apt by running the following command:
sudo apt -y install r-cran-phylobase
Install r-cran-phylobase Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-phylobase using aptitude by running the following command:
sudo aptitude -y install r-cran-phylobase
How To Uninstall r-cran-phylobase on Debian 12
To uninstall only the r-cran-phylobase package we can use the following command:
sudo apt-get remove r-cran-phylobase
Uninstall r-cran-phylobase And Its Dependencies
To uninstall r-cran-phylobase and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-cran-phylobase
Remove r-cran-phylobase Configurations and Data
To remove r-cran-phylobase configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-cran-phylobase
Remove r-cran-phylobase configuration, data, and all of its dependencies
We can use the following command to remove r-cran-phylobase configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-phylobase
Dependencies
r-cran-phylobase have the following dependencies:
- r-base-core
- r-api-4.0
- r-cran-ade4
- r-cran-ape
- r-cran-rcpp
- r-cran-rncl
- r-cran-rnexml
- libc6
- libgcc-s1
- libstdc++6
References
Summary
In this tutorial we learn how to install r-cran-phylobase package on Debian 12 using different package management tools: apt, apt-get and aptitude.
