How To Install r-cran-gsa on Debian 10
Introduction
In this tutorial we learn how to install r-cran-gsa on Debian 10.
What is r-cran-gsa
r-cran-gsa is:
This GNU R package provides functions for gene set analysis.
It determines the significance of pre-defined sets of genes with respect to an outcome variable, such as a group indicator, a quantitative variable or a survival time.
There are three methods to install r-cran-gsa on Debian 10. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-gsa Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-gsa using apt-get by running the following command:
sudo apt-get -y install r-cran-gsa
Install r-cran-gsa Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-gsa using apt by running the following command:
sudo apt -y install r-cran-gsa
Install r-cran-gsa Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-gsa using aptitude by running the following command:
sudo aptitude -y install r-cran-gsa
How To Uninstall r-cran-gsa on Debian 10
To uninstall only the r-cran-gsa package we can use the following command:
sudo apt-get remove r-cran-gsa
Uninstall r-cran-gsa And Its Dependencies
To uninstall r-cran-gsa and its dependencies that are no longer needed by Debian 10, we can use the command below:
sudo apt-get -y autoremove r-cran-gsa
Remove r-cran-gsa Configurations and Data
To remove r-cran-gsa configuration and data from Debian 10 we can use the following command:
sudo apt-get -y purge r-cran-gsa
Remove r-cran-gsa configuration, data, and all of its dependencies
We can use the following command to remove r-cran-gsa configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-gsa
Dependencies
r-cran-gsa have the following dependencies:
References
Summary
In this tutorial we learn how to install r-cran-gsa package on Debian 10 using different package management tools: apt, apt-get and aptitude.