How To Install r-cran-bio3d on Kali Linux

In this tutorial we learn how to install r-cran-bio3d on Kali Linux. r-cran-bio3d is GNU R package for biological structure analysis

Introduction

In this tutorial we learn how to install r-cran-bio3d on Kali Linux.

What is r-cran-bio3d

r-cran-bio3d is:

The bio3d package contains utilities to process, organize and explore protein structure, sequence and dynamics data. Features include the ability to read and write structure, sequence and dynamic trajectory data, perform atom summaries, atom selection, re-orientation, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, and principal component analysis (PCA). In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data.

There are three methods to install r-cran-bio3d on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-cran-bio3d Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-cran-bio3d using apt-get by running the following command:

sudo apt-get -y install r-cran-bio3d

Install r-cran-bio3d Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-cran-bio3d using apt by running the following command:

sudo apt -y install r-cran-bio3d

Install r-cran-bio3d Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-cran-bio3d using aptitude by running the following command:

sudo aptitude -y install r-cran-bio3d

How To Uninstall r-cran-bio3d on Kali Linux

To uninstall only the r-cran-bio3d package we can use the following command:

sudo apt-get remove r-cran-bio3d

Uninstall r-cran-bio3d And Its Dependencies

To uninstall r-cran-bio3d and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-cran-bio3d

Remove r-cran-bio3d Configurations and Data

To remove r-cran-bio3d configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-cran-bio3d

Remove r-cran-bio3d configuration, data, and all of its dependencies

We can use the following command to remove r-cran-bio3d configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-cran-bio3d

Dependencies

r-cran-bio3d have the following dependencies:

References

Summary

In this tutorial we learn how to install r-cran-bio3d package on Kali Linux using different package management tools: apt, apt-get and aptitude.