How To Install r-bioc-tcgabiolinksgui.data on Ubuntu 22.04
Introduction
In this tutorial we learn how to install r-bioc-tcgabiolinksgui.data
on Ubuntu 22.04.
What is r-bioc-tcgabiolinksgui.data
r-bioc-tcgabiolinksgui.data is:
Supporting data for the GNU R TCGAbiolinksGUI package. This package contains the following objects:
- For gene annotation:
- gene.location.hg38
- gene.location.hg19
- For Glioma Classifier function:
- glioma.gcimp.model
- glioma.idh.model
- glioma.idhmut.model
- glioma.idhwt.model
- For linkedOmics database:
- linkedOmicsData
There are three methods to install r-bioc-tcgabiolinksgui.data
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-tcgabiolinksgui.data Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-tcgabiolinksgui.data
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-tcgabiolinksgui.data
Install r-bioc-tcgabiolinksgui.data Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-tcgabiolinksgui.data
using apt
by running the following command:
sudo apt -y install r-bioc-tcgabiolinksgui.data
Install r-bioc-tcgabiolinksgui.data Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-tcgabiolinksgui.data
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-tcgabiolinksgui.data
How To Uninstall r-bioc-tcgabiolinksgui.data on Ubuntu 22.04
To uninstall only the r-bioc-tcgabiolinksgui.data
package we can use the following command:
sudo apt-get remove r-bioc-tcgabiolinksgui.data
Uninstall r-bioc-tcgabiolinksgui.data And Its Dependencies
To uninstall r-bioc-tcgabiolinksgui.data
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove r-bioc-tcgabiolinksgui.data
Remove r-bioc-tcgabiolinksgui.data Configurations and Data
To remove r-bioc-tcgabiolinksgui.data
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge r-bioc-tcgabiolinksgui.data
Remove r-bioc-tcgabiolinksgui.data configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-tcgabiolinksgui.data
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-tcgabiolinksgui.data
References
Summary
In this tutorial we learn how to install r-bioc-tcgabiolinksgui.data
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.