How To Install r-bioc-rhtslib on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-rhtslib on Kali Linux.
What is r-bioc-rhtslib
r-bioc-rhtslib is:
This package provides version 1.7 of the ‘HTSlib’ C library for high-throughput sequence analysis. The package is primarily useful to developers of other R packages who wish to make use of HTSlib. Motivation and instructions for use of this package are in the vignette, vignette(package=“Rhtslib”, “Rhtslib”).
There are three methods to install r-bioc-rhtslib on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-rhtslib Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-bioc-rhtslib using apt-get by running the following command:
sudo apt-get -y install r-bioc-rhtslibInstall r-bioc-rhtslib Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-bioc-rhtslib using apt by running the following command:
sudo apt -y install r-bioc-rhtslibInstall r-bioc-rhtslib Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-bioc-rhtslib using aptitude by running the following command:
sudo aptitude -y install r-bioc-rhtslibHow To Uninstall r-bioc-rhtslib on Kali Linux
To uninstall only the r-bioc-rhtslib package we can use the following command:
sudo apt-get remove r-bioc-rhtslibUninstall r-bioc-rhtslib And Its Dependencies
To uninstall r-bioc-rhtslib and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-rhtslibRemove r-bioc-rhtslib Configurations and Data
To remove r-bioc-rhtslib configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-rhtslibRemove r-bioc-rhtslib configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-rhtslib configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-rhtslibDependencies
r-bioc-rhtslib have the following dependencies:
References
Summary
In this tutorial we learn how to install r-bioc-rhtslib package on Kali Linux using different package management tools: apt, apt-get and aptitude.